Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940276.1_cds_XP_016484571.1_75575
CDS Infomation

[gene=LOC107805099] [db_xref=GeneID:107805099] [protein=filament-like plant protein isoform X4] [protein_id=XP_016484571.1] [location=join(54131..54241,55279..55471,55671..56593,56792..57088,57209..57595)] [gbkey=CDS]
Sequence

ATGGAGAAGAGGAACTGGTTGTGGAAAAGGAGACCTACTGAGAAGAGCCTTGGGGAAACT
GAGAGTTGTGGTTCATTGTCTTCACATTCAGAGAGACACTCTGATGAGCAGGATGCATTA
AAAGAAACTCCAGATCATGACAACCAGTCACCGGAAGTAACCTCAAAAGCTGCAACTATT
GATCATGAAGCAAAGGAAAGTCCTAGGAAGTTGATAGAAAAGTTATCAGCTGCTATAGTC
AATGTTAGTGCCAAAGAAGACTTAGTTAAGCAGCATGTTAAAGTAGCAGAAGAAGCTGTT
GCAGGTTGGGAAAAGGCAGAAAATGAGGTTGCAGTTCTAAAGCAGCAACTCGAGGCAGCT
GTGCAGCAGAACTTGACTTTGGATGTTCGCGTCAACCATCTTAATGGTGCTCTCAAGGAA
TGTGTCAGGCAGCTGAGACAAGCGAGAGATGAGCAAGAGCAAAGAATTCAGGATGCTGTG
GAAGAGAAGAAAAAAGAATGGGACTCTGTGAAAGCTGCACTTGAAAATCAGCTACTTGAG
CTTCAGACACAAGCTGAGGCTAGTGGAACTGGTTCTCCTGTTTCTACTGATCCGGATGTT
CTTGTCAGGCTTGAGTGTCTAGAGAAGGAGAACACAGCTCTTAAACTCGACCTTTGTTCT
CGTTCAGAGGAGTTGCAAATTACGACCATAGAGCGTGACTTGAGCACCCAAGCAGCTGAA
ACTGCTAGCAAGCAGCAGCTAGAGGGCATAAAGAAGGTGACCAAGCTTGAAACCGAGTGT
CGAAGATTACAAGCCTTGGCTCGCAAATCATCCCTACTCAGTGACCAAAGATCCTTTGAT
AGCCACATGATGCACAAACTGGAAACAAGTGAATGGGAACAAAGTTGCTCTGATTCATGG
GCATCAGCACTAATTGCTGAGCTCAATCAATTTAAGAATGATAAAGCCATGCCTAAAACT
CTTGTTGCCCATTCTATGGAAATTGACATGATGGATGATTTTTTGGAGATGGAGAGACTC
GCTGCAGTATCTGAAACTGTGAATAAAGCCTCTTCACTTACATGCGATGCTGTTGCCCAT
GACTCCCCAATTGAAGAGAATCCCCTGGAAGCAGAATGTGAGGCCATTTCACAAAGGGTA
GCCGAATTAGAACAAAAGCTGGAGAAGATTGAAGCAGAGAAAGCTGAACTGGAGAATGCT
TTATGTGAGAGCGAAGATGCCCTTAAGGTGTCCGACTTGCAGCTTAAGGAAGCTCAAATC
AAGATAGAAGAGCTGCAGAAGGAGCTAGATGTAGTGAATGAGTCGAAAGAGTTGCTAGAG
GTTCAACTCTTTGGCATGGAAGTAGAAGCACGGACTATGTCAACAAACATTGATTCTTTA
AAGAAAGAAGTTGAAAGAGAACGATCCTTGTCATCTGATATGGAAACTAAGTGCCACGAA
TTGGAAATTGAACTAAGAAGAAAATCTCAGGAAGCTGAACTTCAGAAAGCTTCTAGTTCA
AATGGTGAATCGAAAATAAAGCAGGAAGATTTAGCTGTAGCTGCTGACAAGCTTGCAGAA
TGCCAGAAAACAATTGCATCTCTTGGCAAACAGCTTCAATCATTAGCTACTTTAGAAGAT
TTCTTGATAGACACTGCAAATCTTCCTGGATTTTCTCGGGGAGGACCAGTTGTGGCTAGA
GCTAGTGGAGAGGAATGGAAGTTGCATGTAAATGAGACATTTACCCAAAGACAGAATCCA
GATACTTCAAAGATTGGCAATTCTAGTAATTCTATGAATGGAAATGAAGGAGAATCGTCA
TCTTCTTCCTCGTCATCATCTACTTCATCAGCTACTCAGGTGATCACCTCCAAAAGTAAA
AATGGTTTTGGGAAGATGTTTTCTCGAAGCAAAACTGGAATTCAGCTCTAA

Peptide Sequence

PEP ID

XP_016484571.1
PEP Infomation

PREDICTED: filament-like plant protein isoform X4 [Nicotiana tabacum]
Sequence

MEKRNWLWKRRPTEKSLGETESCGSLSSHSERHSDEQDALKETPDHDNQSPEVTSKAATI
DHEAKESPRKLIEKLSAAIVNVSAKEDLVKQHVKVAEEAVAGWEKAENEVAVLKQQLEAA
VQQNLTLDVRVNHLNGALKECVRQLRQARDEQEQRIQDAVEEKKKEWDSVKAALENQLLE
LQTQAEASGTGSPVSTDPDVLVRLECLEKENTALKLDLCSRSEELQITTIERDLSTQAAE
TASKQQLEGIKKVTKLETECRRLQALARKSSLLSDQRSFDSHMMHKLETSEWEQSCSDSW
ASALIAELNQFKNDKAMPKTLVAHSMEIDMMDDFLEMERLAAVSETVNKASSLTCDAVAH
DSPIEENPLEAECEAISQRVAELEQKLEKIEAEKAELENALCESEDALKVSDLQLKEAQI
KIEELQKELDVVNESKELLEVQLFGMEVEARTMSTNIDSLKKEVERERSLSSDMETKCHE
LEIELRRKSQEAELQKASSSNGESKIKQEDLAVAADKLAECQKTIASLGKQLQSLATLED
FLIDTANLPGFSRGGPVVARASGEEWKLHVNETFTQRQNPDTSKIGNSSNSMNGNEGESS
SSSSSSSTSSATQVITSKSKNGFGKMFSRSKTGIQL

Transcript Sequence

Gene sequence data has not been registered.